Hackweek Links

• Slack link: tinyurl.com/itcoocean-slack
• The spreadsheet with all the sdmpredictors variables
• sdmpredictors help page, article on Bio-Oracle2 variables https://core.ac.uk/reader/153397110
• article on MARSPEC variables https://esapubs.org/archive/ecol/E094/086/metadata.php
• Team members
• Where are the scripts? Home/shared/incois-scripts
• How do I get them into my directory? Navigate to the script you want, click the little “cog” in the File panel, Copy to your directory.
• CMIP6 Data but sdmpredictors includes some future simulations

Getting RS data

• Use sdmpredictors for the hackweek so you have some data. The spreadsheet with all the sdmpredictors variables
• From NASA Earthdata: In Home shared/earthaccess-gallery/notebooks/Sea_Level_Rise/SSL.ipynb
• R and Python examples: shared/incois-scripts
• Zarr file
  • shared/2023-Hackbook/python-notebooks/02_Using_Data.ipynb
  • shared/2023-Hackbook/python-notebooks/02_Get_Points.ipynb
• Copernicus: Search the Slack for “Copenicus”. Someone got it working in R via a R package for Copenicus.

Model evaluation

• https://rspatial.org/raster/sdm/5_sdm_models.html
• BRTs with dismo https://rspatial.org/raster/sdm/9_sdm_brt.html
• New link